CDS

Accession Number TCMCG016C05670
gbkey CDS
Protein Id OMO94156.1
Location join(5234..5403,5819..5976,6082..6467,6978..7277,7361..7450,9556..9679,9988..10151,10589..10822)
Organism Corchorus capsularis
locus_tag CCACVL1_06137

Protein

Length 541aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007933.1
Definition SecY/SEC61-alpha family [Corchorus capsularis]
Locus_tag CCACVL1_06137

EGGNOG-MAPPER Annotation

COG_category U
Description Preprotein translocase subunit
KEGG_TC 3.A.5.4,3.A.5.8,3.A.5.9
KEGG_Module M00401        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K10956        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03060        [VIEW IN KEGG]
ko04141        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
ko05110        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
map05110        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009535        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009668        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010027        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034357        [VIEW IN EMBL-EBI]
GO:0042651        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044436        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055035        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTGATAACGGTCAGAGAAGCTTCTCTTAGCTTCAACCTCTCAAGACTGTCTTATCCCAATCCCAGACCTTCACCAACACTCAAAGGTTATGTTTGTAGAGCCAGTTTAACTGTCCATAGAAAACCCAACTCTGACCAATCATGGAACCTTGGTCTTCTTTCTTACAGCTATAAAGGATCTGTTTTTGATCCCTTGCGTATCAATCCAGATGTCCCTTCTGGTCTAAATGATGTCTGGGAAAGTTTTCTAGCCTTGTTAGCACCTACATTTGAGAGTACCTCTGGTACAAAAAAGGAGAAGTCTTCTTCAGCTCGAGGAGTGGCAGCTGCAATTGAGGACAGTTCTATTGACTTTGGAGACTTCTTCAAAGGCCCATTACCTGGAAAATTTCTCAAGCTTTTAGGGTTTTTAGCCCTATCACGTCTGGGAGTTTATATACCTCTAGGCGGGGTTAACCGAGAGGCATTTGTTGGCAATTTGGATCAAAACAGTCTACTGAGCACTTTGGATTCATTCTCTGGAGGAGGCATTGGTAGACTTGGTATATGCTCCCTTGGAATTGTTCCCTTCATTAATGCACAAATTGTGTTTCAACTCCTTGCCCAAGTTTACCCTAAATTGCAAGATCTTCAGAAAAGAGAAGGTGAAGCAGGAAGAAAGAAAGTTCTTCAGTATACTAGATATGCTTCAGTTGGTTTTGCTATAGTACAGGCAATTGGTCAAGTGCTTTACCTTCGTCCATATGTTAATGACTTTAGCACAGAGTGGGTTCTCTCCTCTGTCACTCTATTGACGCTTGGTGCTGTACTTACAACATATATTGGGGAACGGATTTCTGATCTAAAACTTGGAAATGGCACATCTCTTCTTATATTTACAAATATTCTATCCTACTTGCCAGCATCTTTTGGGAGGACAGTTGCACAGGCTTATCAGGATGGTAACTACATTGGACTTCTTACCCTCATTATCTCATTCTTCCTACTGGTCCTTGGCATTGTCTATGTTCAGGAAGCAGAGAGGAAGATTCCACTCAACTATGCCTCAAGGTACACCAGCAGAAGTGGAGGGCTTCAAAAATCGGCTTACCTACCTTTCAAGGTAAATAGCTCTGGAGTGATGCCAATTATATTTTCTACATCATCTCTAGCTCTTCCTGGTACTTTAGCACGATTTACTGGCTTATCTGTTCTAAAGAAGGCTGCAGTGGCTTTGAATCCAGGAGGTTCTTTCTACCTTCCTACCAATATCTTGTTAATAGCCTTTTTCAATTACTACTATACTTTCCTCCAACTTGACCCGGATGATGTTAGCGAACAACTGAAGCGCCAAGGTGCTTCAATTCCACTGGTCCGACCTGGTAAAAGTACAGCAGCATTTCTGAAGACGGTTCTTAGCCGGATATCAGTTCTGGGTTCAGCTTTTCTAGCAATCTTGGCTGCTGGTCCTGCTGTGATTGAGCAAACTACACACTTGACTGCGTTCCGAGGATTTGCAGGCACTTCTGTTCTTATTCTTGTTGGATGTGCCACTGATACTGCAAGAAAAGTTCAAGCAGAGATAATATCTCAGAAGTACAAGAACATAGAGTTTTATGACTTTGACAGGTACGGCCCCCCGTAA
Protein:  
MLITVREASLSFNLSRLSYPNPRPSPTLKGYVCRASLTVHRKPNSDQSWNLGLLSYSYKGSVFDPLRINPDVPSGLNDVWESFLALLAPTFESTSGTKKEKSSSARGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGAVLTTYIGERISDLKLGNGTSLLIFTNILSYLPASFGRTVAQAYQDGNYIGLLTLIISFFLLVLGIVYVQEAERKIPLNYASRYTSRSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSVLKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDFDRYGPP